Company Logo

CorneaMD: A Multiomics Database for Corneal Diseases

Comparative Matrix

CorneaMD eyeIntegration EyeDiseases iSyTE2.0 RetNet
General information Focus Multi-omics landscape and genotype-phenotype mappings of corneal diseases RNA-seq profiles of healthy human ocular tissues Transcriptomic and genetic landscape of human ocular diseases Integrative systems tools and molecular mechanisms of lens disorders Genetic repository of inherited retinal diseases
Tissues Cornea, Sclera, Conjunctiva, Tear, Aqueous humor, Trigeminal ganglia, Organoid Cornea, Conjunctiva, Eye lid, Lens, Choroid, Retina, Optic nerve Cornea, Sclera, Lens, Uvea, Retina, Optic nerve, Lacrimal gland Lens Retina
Species Human, Mouse, Rabbit, Zebrafish, Cynomolgus macaque, Rhesus macaque Human Human, Mouse Human, Mouse Human
Datasets 143 117 - - -
Sample size 1,312 - 1,897 - -
First publication - Apr-2017 Jun-2021 Sep-2017 1998
Last update Jun-2026 Sep-2023 Jun-2021 Jun-2022 Apr-2023
Multi-omics levels 6 1 3 2 1
Total cells 1,303,061 - 150,217 - -
Cell types 176 - - - -
Website link        https://corneamd.cn        https://eyeintegration.nei.
nih.gov/		         https://eyediseases.        
        bio-data.cn        		 https://research.bioinformatics.
udel.edu/iSyTE		 https://retnet.org
Omics data types Bulk RNA-seq yes yes yes yes no
Single-cell RNA-seq yes yes yes no no
Spatial transcriptomics yes no no no no
Epigenomics yes no yes no no
Proteomics yes no no yes no
Metabolomics yes no no no no
Genomics no no no no yes
Query & analysis suite Gene-Disease explorer yes no yes no yes
Single-cell gene mapping yes no no no no
Spatial gene visualization yes no no no no
Cell proportion comparison yes no no no no
Inter-group differential expression yes yes yes yes no
Functional enrichment & visualization yes no no yes no
Gene set scoring yes no no no no
Embedded IGV genome browser yes no yes no no